Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).
These curated entries have 63 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS01205: 2-hydroxy-acid oxidase is similar to: | PaperBLAST |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 28% id, 92% cov |
| HSERO_RS12985: L-lactate dehydrogenase is similar to: | PaperBLAST |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 24% id, 89% cov |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 40% id, 36% cov |
| HSERO_RS19095: glycolate oxidase is similar to: | PaperBLAST |
lutA / O07020: iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 22% id, 96% cov |
| HSERO_RS00730: 4-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 34% id, 44% cov |
| HSERO_RS11015: inosine 5'-monophosphate dehydrogenase is similar to: | PaperBLAST |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 28% id, 37% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory