Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 9 curated entries in PaperBLAST's database that match '1.1.1.31' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS15390: 3-hydroxyisobutyrate dehydrogenase is similar to: | PaperBLAST |
MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa | 60% id, 97% cov |
PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 56% id, 100% cov |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 56% id, 99% cov |
HSERO_RS04805: 3-hydroxyisobutyrate dehydrogenase is similar to: | PaperBLAST |
MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa | 35% id, 97% cov |
PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 35% id, 98% cov |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 34% id, 98% cov |
HSERO_RS21160: 3-hydroxyisobutyrate dehydrogenase is similar to: | PaperBLAST |
mmsB / Q76KL5: 3-hydroxyisobutyrate dehydrogenase subunit (EC 1.1.1.31) from Pseudomonas putida | 34% id, 98% cov |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 34% id, 98% cov |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 33% id, 99% cov |
HSERO_RS10090: oxidoreductase is similar to: | PaperBLAST |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 32% id, 94% cov |
P9WNY5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Mycobacterium tuberculosis | 32% id, 96% cov |
PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 32% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory