Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 7 curated entries in PaperBLAST's database that match '1.1.1.376' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS13590: D-galactose-1-dehydrogenase is similar to: | PaperBLAST |
ARAA_AZOBR / Q53TZ2: L-arabinose 1-dehydrogenase (NAD(P)(+)); D-galactose 1-dehydrogenase; EC 1.1.1.376; EC 1.1.1.120; EC 1.1.1.48 from Azospirillum brasilense | 55% id, 98% cov |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 25% id, 59% cov |
| HSERO_RS23040: NAD-dependent dehydratase is similar to: | PaperBLAST |
ARADH_HALVD / D4GP33: L-arabinose 1-dehydrogenase (NAD(P)(+)); L-AraDH; EC 1.1.1.376 from Haloferax volcanii | 30% id, 98% cov |
| HSERO_RS12095: myo-inositol 2-dehydrogenase is similar to: | PaperBLAST |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 24% id, 87% cov |
| HSERO_RS20995: NAD dependent epimerase/dehydratase is similar to: | PaperBLAST |
ARADH_HALVD / D4GP33: L-arabinose 1-dehydrogenase (NAD(P)(+)); L-AraDH; EC 1.1.1.376 from Haloferax volcanii | 32% id, 65% cov |
| HSERO_RS12100: oxidoreductase is similar to: | PaperBLAST |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 22% id, 92% cov |
| HSERO_RS20980: oxidoreductase is similar to: | PaperBLAST |
D4GR07: L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376) from Haloferax volcanii | 23% id, 75% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory