Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 2 curated entries in PaperBLAST's database that match '1.1.1.378' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 33 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS02535: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 41% id, 99% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 37% id, 98% cov |
| HSERO_RS05340: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 39% id, 99% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 39% id, 96% cov |
| HSERO_RS16605: oxidoreductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 37% id, 98% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 35% id, 98% cov |
| HSERO_RS05565: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 37% id, 98% cov |
| HSERO_RS02915: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 37% id, 98% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 36% id, 98% cov |
| HSERO_RS09605: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 36% id, 98% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 35% id, 98% cov |
| HSERO_RS19050: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 36% id, 98% cov |
| HSERO_RS22305: oxidoreductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 36% id, 97% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 35% id, 98% cov |
| HSERO_RS17460: oxidoreductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 36% id, 96% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 34% id, 97% cov |
| HSERO_RS08965: sugar dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 35% id, 97% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 35% id, 96% cov |
| HSERO_RS18540: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 35% id, 95% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 33% id, 96% cov |
| HSERO_RS19455: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 34% id, 97% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 33% id, 97% cov |
| HSERO_RS06265: 3-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 34% id, 98% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 30% id, 98% cov |
| HSERO_RS11255: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 34% id, 99% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 98% cov |
| HSERO_RS18690: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 33% id, 98% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 32% id, 99% cov |
| HSERO_RS12375: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 34% id, 97% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 99% cov |
| HSERO_RS12955: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 33% id, 98% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 32% id, 97% cov |
| HSERO_RS05210: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 33% id, 96% cov |
| HSERO_RS17235: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 32% id, 98% cov |
| HSERO_RS05240: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 32% id, 97% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 99% cov |
| HSERO_RS22235: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 32% id, 97% cov |
| HSERO_RS01475: oxidoreductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 34% id, 91% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 93% cov |
| HSERO_RS19730: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 98% cov |
| HSERO_RS15035: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 31% id, 97% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 27% id, 98% cov |
| HSERO_RS12770: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 96% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 29% id, 97% cov |
| HSERO_RS06565: 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 31% id, 96% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 29% id, 96% cov |
| HSERO_RS19365: oxidoreductase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 30% id, 96% cov |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 30% id, 97% cov |
| HSERO_RS22475: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 30% id, 97% cov |
| HSERO_RS11540: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 30% id, 95% cov |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 27% id, 99% cov |
| HSERO_RS06765: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 28% id, 98% cov |
| HSERO_RS12025: enoyl-ACP reductase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 27% id, 98% cov |
| HSERO_RS23160: short-chain dehydrogenase is similar to: | PaperBLAST |
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii | 33% id, 78% cov |
| HSERO_RS19875: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. | 30% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 32 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory