Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 35 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS17015: sulfurtransferase
is similar to:		 PaperBLAST

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

 100% id,
100% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

 61% id,
99% cov

Dshi_0551: D-xylulose reductase (EC 1.1.1.9) from Dinoroseobacter shibae

 61% id,
99% cov

More...

HSERO_RS05485: phosphoesterase
is similar to:		 PaperBLAST

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus

 36% id,
96% cov

A0A3S7PMC4: D-xylulose reductase (EC 1.1.1.9) from Torulaspora delbrueckii

 37% id,
94% cov

DHSO_SHEEP / P07846: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries

 36% id,
96% cov

More...

HSERO_RS17460: oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 35% id,
100% cov

HSERO_RS12375: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 34% id,
99% cov

HSERO_RS05480: gluconate 5-dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 34% id,
99% cov

HSERO_RS19365: oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 34% id,
99% cov

HSERO_RS12955: short-chain dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 33% id,
98% cov

HSERO_RS02925: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 33% id,
100% cov

HSERO_RS19055: oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
100% cov

HSERO_RS08965: sugar dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 33% id,
97% cov

HSERO_RS06350: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
98% cov

HSERO_RS17235: 3-ketoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
97% cov

HSERO_RS06565: 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 31% id,
100% cov

HSERO_RS04830: alcohol dehydrogenase
is similar to:		 PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

 34% id,
91% cov

A0A3S7PMC4: D-xylulose reductase (EC 1.1.1.9) from Torulaspora delbrueckii

 31% id,
88% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

 31% id,
85% cov

More...

HSERO_RS02915: short-chain dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 31% id,
98% cov

HSERO_RS02535: short-chain dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 31% id,
97% cov

HSERO_RS16605: oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 30% id,
98% cov

HSERO_RS15035: 3-ketoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 29% id,
100% cov

HSERO_RS06765: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 30% id,
97% cov

HSERO_RS18690: short-chain dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 29% id,
100% cov

HSERO_RS14040: alcohol dehydrogenase
is similar to:		 PaperBLAST

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

 30% id,
94% cov

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

 28% id,
95% cov

Q59545: xylitol dehydrogenase (EC 1.1.1.9) from Morganella morganii

 29% id,
90% cov

More...

HSERO_RS13615: alcohol dehydrogenase
is similar to:		 PaperBLAST

G3AIP8: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

 30% id,
89% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

 28% id,
94% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

 27% id,
96% cov

More...

HSERO_RS05210: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 26% id,
99% cov

HSERO_RS12025: enoyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 26% id,
100% cov

HSERO_RS02795: alcohol dehydrogenase
is similar to:		 PaperBLAST

A0A1B4XTS0: L-arabinitol 4-dehydrogenase (EC 1.1.1.12); D-xylulose reductase (EC 1.1.1.9) from Meyerozyma caribbica

 27% id,
95% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

 27% id,
94% cov

A0A3S7PMB5: D-xylulose reductase (EC 1.1.1.9) from Pichia kudriavzevii

 25% id,
89% cov

More...

HSERO_RS22475: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 25% id,
100% cov

HSERO_RS05890: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 32% id,
78% cov

HSERO_RS01475: oxidoreductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 34% id,
72% cov

HSERO_RS07455: NADPH:quinone oxidoreductase
is similar to:		 PaperBLAST

Dshi_0551: D-xylulose reductase (EC 1.1.1.9) from Dinoroseobacter shibae

 25% id,
96% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

 23% id,
95% cov

Q59545: xylitol dehydrogenase (EC 1.1.1.9) from Morganella morganii

 25% id,
46% cov

More...

HSERO_RS19875: 3-oxoacyl-ACP reductase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 34% id,
69% cov

HSERO_RS17735: quinone oxidoreductase
is similar to:		 PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

 30% id,
73% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

 28% id,
77% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

 35% id,
22% cov

More...

HSERO_RS12220: dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 29% id,
69% cov

HSERO_RS08800: NAD(P)H quinone oxidoreductase
is similar to:		 PaperBLAST

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

 26% id,
51% cov

HSERO_RS22905: 3-alpha-hydroxysteroid dehydrogenase
is similar to:		 PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

 25% id,
41% cov

HSERO_RS17470: NADPH-quinone reductase
is similar to:		 PaperBLAST

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

 41% id,
22% cov

DHSO_SHEEP / P07846: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries

 37% id,
21% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

 35% id,
22% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 31 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1240975-1242051 (frame +1) on NC_014323
is similar to:		 PaperBLAST

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus
Also see hits to annotated proteins above

 36% id,
98% cov

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana
Also see hits to annotated proteins above

 34% id,
97% cov

XYL2_ASPOR / Q86ZV0: D-xylulose reductase A; Xylitol dehydrogenase A; EC 1.1.1.9 from Aspergillus oryzae
GI|83774265: xylitol dehydrogenase; EC 1.1.1.9 from Aspergillus oryzae
xdhA / Q86ZV0: NAD+-dependent xylitol dehydrogenase (EC 1.1.1.9) from Aspergillus oryzae
Q86ZV0: D-xylulose reductase (EC 1.1.1.9) from Aspergillus oryzae
Also see hits to annotated proteins above

 35% id,
94% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory