Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 15 curated entries in PaperBLAST's database that match '1.1.2.8' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS16735: alcohol dehydrogenase is similar to: | PaperBLAST |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 53% id, 90% cov |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 53% id, 90% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 53% id, 90% cov |
| HSERO_RS22390: alcohol dehydrogenase is similar to: | PaperBLAST |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 51% id, 88% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 51% id, 88% cov |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 51% id, 88% cov |
| HSERO_RS22810: alcohol dehydrogenase is similar to: | PaperBLAST |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 42% id, 90% cov |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 42% id, 90% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 42% id, 90% cov |
| HSERO_RS08315: cytochrome C is similar to: | PaperBLAST |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 38% id, 88% cov |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 38% id, 88% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 38% id, 88% cov |
| HSERO_RS18760: cytochrome C is similar to: | PaperBLAST |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 37% id, 88% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 37% id, 88% cov |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 37% id, 88% cov |
| HSERO_RS06965: alcohol dehydrogenase is similar to: | PaperBLAST |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 39% id, 83% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 39% id, 83% cov |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 39% id, 83% cov |
| HSERO_RS06615: cytochrome protein is similar to: | PaperBLAST |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 36% id, 90% cov |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 35% id, 90% cov |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 35% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory