Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 24 curated entries in PaperBLAST's database that match '1.1.3.2'.
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS01205: 2-hydroxy-acid oxidase is similar to: | PaperBLAST |
Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. | 41% id, 98% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 36% id, 93% cov |
A9QH69: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 30% id, 89% cov |
| HSERO_RS12985: L-lactate dehydrogenase is similar to: | PaperBLAST |
Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. | 40% id, 96% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 37% id, 93% cov |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 24% id, 89% cov |
| HSERO_RS23645: glycerol-3-phosphate dehydrogenase is similar to: | PaperBLAST |
Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis | 32% id, 60% cov |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 33% id, 56% cov |
| HSERO_RS21645: hydroxyglutarate oxidase is similar to: | PaperBLAST |
glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides | 27% id, 71% cov |
| HSERO_RS04840: glycerol-3-phosphate dehydrogenase is similar to: | PaperBLAST |
Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis | 33% id, 56% cov |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 32% id, 55% cov |
| HSERO_RS23855: choline dehydrogenase is similar to: | PaperBLAST |
Q6CEP8: long-chain-alcohol oxidase (EC 1.1.3.20) from Yarrowia lipolytica | 32% id, 53% cov |
| HSERO_RS11015: inosine 5'-monophosphate dehydrogenase is similar to: | PaperBLAST |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 28% id, 37% cov |
lctO / D4YFM2: lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans | 28% id, 37% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 34% id, 25% cov |
| HSERO_RS24000: choline dehydrogenase is similar to: | PaperBLAST |
Q6CEP8: long-chain-alcohol oxidase (EC 1.1.3.20) from Yarrowia lipolytica | 37% id, 25% cov |
fao1 / Q9P8D8: long-chain fatty alcohol oxidase (EC 1.1.3.20) from [Candida] cloacae | 34% id, 9% cov |
| HSERO_RS21535: NADH dehydrogenase is similar to: | PaperBLAST |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 23% id, 39% cov |
| HSERO_RS07275: D-amino acid dehydrogenase is similar to: | PaperBLAST |
GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae | 28% id, 28% cov |
| HSERO_RS05695: D-amino acid oxidase is similar to: | PaperBLAST |
GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae | 41% id, 11% cov |
| HSERO_RS01275: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 28% id, 15% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1059544-1061169 (frame +1) on NC_014323 is similar to: | PaperBLAST |
Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis | 32% id, 58% cov |
| 3233601-3235037 (frame +3) on NC_014323 is similar to: | PaperBLAST |
FAO1_LOTJA / B5WWZ8: Long-chain-alcohol oxidase FAO1; Long-chain fatty alcohol oxidase 1; EC 1.1.3.20 from Lotus japonicus | 38% id, 7% cov |
Lawrence Berkeley National Laboratory