Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 7 curated entries in PaperBLAST's database that match '1.1.3.2' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS01205: 2-hydroxy-acid oxidase is similar to: | PaperBLAST |
Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. | 41% id, 98% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 36% id, 93% cov |
A9QH69: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 30% id, 89% cov |
| HSERO_RS12985: L-lactate dehydrogenase is similar to: | PaperBLAST |
Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. | 40% id, 96% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 37% id, 93% cov |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 24% id, 89% cov |
| HSERO_RS11015: inosine 5'-monophosphate dehydrogenase is similar to: | PaperBLAST |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 28% id, 37% cov |
lctO / D4YFM2: lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans | 28% id, 37% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 34% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory