Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 17 curated entries in PaperBLAST's database that match '1.13.11.2' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 0 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3814242-3815606 (frame +3) on NC_014323 is similar to: | PaperBLAST |
P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida | 32% id, 88% cov |
Lawrence Berkeley National Laboratory