Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 10 curated entries in PaperBLAST's database that match '1.14.13.2' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS19905: 4-hydroxybenzoate 3-monooxygenase is similar to: | PaperBLAST |
RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis | 52% id, 99% cov |
Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens | 51% id, 97% cov |
PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens | 51% id, 98% cov |
| HSERO_RS19700: 3-(3-hydroxyphenyl)propionate hydroxylase is similar to: | PaperBLAST |
PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens | 27% id, 83% cov |
PHHY_PSEAE / P20586: p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas aeruginosa | 27% id, 83% cov |
Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens | 26% id, 83% cov |
| HSERO_RS02705: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q6SSJ6: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2); 3-hydroxybenzoate 4-monooxygenase (EC 1.14.13.23) from Comamonas testosteroni | 24% id, 86% cov |
| HSERO_RS07810: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q6SSJ6: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2); 3-hydroxybenzoate 4-monooxygenase (EC 1.14.13.23) from Comamonas testosteroni | 24% id, 71% cov |
| HSERO_RS19590: dihydropyrimidine dehydrogenase subunit A is similar to: | PaperBLAST |
pobA / F2JUE7: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Marinomonas mediterranea | 27% id, 55% cov |
RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis | 29% id, 27% cov |
| HSERO_RS20960: oxygenase is similar to: | PaperBLAST |
PHHY_PSEAE / P20586: p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas aeruginosa | 34% id, 33% cov |
PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens | 33% id, 33% cov |
Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens | 36% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory