Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.24' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS05395: succinate-semialdehyde dehdyrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

68% id,
99% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

63% id,
100% cov

SSDH_RAT / P51650: Succinate-semialdehyde dehydrogenase, mitochondrial; SSADH; Aldehyde dehydrogenase family 5 member A1; NAD(+)-dependent succinic semialdehyde dehydrogenase; EC 1.2.1.24 from Rattus norvegicus

58% id,
91% cov

More...

HSERO_RS07235: aldehyde dehydrogenase
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

65% id,
99% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

43% id,
99% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

42% id,
96% cov

More...

HSERO_RS05645: succinate-semialdehyde dehdyrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

51% id,
98% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

49% id,
100% cov

Q9VBP6: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Drosophila melanogaster

50% id,
97% cov

More...

HSERO_RS19695: aldehyde dehydrogenase
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

48% id,
98% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

41% id,
97% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

41% id,
92% cov

More...

HSERO_RS19755: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

41% id,
97% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

37% id,
99% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

38% id,
93% cov

More...

HSERO_RS11260: aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

40% id,
95% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

36% id,
98% cov

SSDH_ARATH / Q9SAK4: Succinate-semialdehyde dehydrogenase, mitochondrial; At-SSADH1; Aldehyde dehydrogenase family 5 member F1; NAD(+)-dependent succinic semialdehyde dehydrogenase; Protein ENLARGED FIL EXPRESSING DOMAIN 1; EC 1.2.1.24 from Arabidopsis thaliana

38% id,
90% cov

More...

HSERO_RS09465: aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

40% id,
95% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

34% id,
98% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

33% id,
97% cov

More...

HSERO_RS05115: aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

41% id,
91% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

40% id,
94% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

36% id,
94% cov

More...

HSERO_RS05710: aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

39% id,
95% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

37% id,
98% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

36% id,
96% cov

More...

HSERO_RS04810: aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

38% id,
96% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

36% id,
97% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

35% id,
97% cov

More...

HSERO_RS05765: salicylaldehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

36% id,
97% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

34% id,
99% cov

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

34% id,
98% cov

More...

HSERO_RS22910: benzaldehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

35% id,
100% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

34% id,
98% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

34% id,
96% cov

More...

HSERO_RS17620: aldehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

34% id,
97% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

34% id,
94% cov

Q9VBP6: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Drosophila melanogaster

36% id,
87% cov

More...

HSERO_RS10090: oxidoreductase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

34% id,
94% cov

HSERO_RS24005: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

33% id,
95% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

31% id,
94% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

31% id,
95% cov

More...

HSERO_RS15395: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

31% id,
99% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

30% id,
94% cov

Q97XS9: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

28% id,
99% cov

More...

HSERO_RS23245: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

31% id,
94% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

31% id,
92% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

30% id,
94% cov

More...

HSERO_RS00905: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

29% id,
98% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

32% id,
88% cov

SSDH_RAT / P51650: Succinate-semialdehyde dehydrogenase, mitochondrial; SSADH; Aldehyde dehydrogenase family 5 member A1; NAD(+)-dependent succinic semialdehyde dehydrogenase; EC 1.2.1.24 from Rattus norvegicus

29% id,
96% cov

More...

HSERO_RS15390: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

29% id,
99% cov

HSERO_RS04805: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

27% id,
98% cov

HSERO_RS23860: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

30% id,
87% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

30% id,
89% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

30% id,
85% cov

More...

HSERO_RS20590: enoyl-CoA hydratase
is similar to:
PaperBLAST

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

26% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory