Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS09465: aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

79% id,
97% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

77% id,
97% cov

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

70% id,
97% cov

More...

HSERO_RS05115: aldehyde dehydrogenase
is similar to:
PaperBLAST

H281DRAFT_01117: acetaldehyde dehydrogenase (EC 1.2.1.3) from Paraburkholderia bryophila

68% id,
100% cov

BPHYT_RS25810: acetaldehyde dehydrogenase (EC 1.2.1.3) from Burkholderia phytofirmans

68% id,
100% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

45% id,
94% cov

More...

HSERO_RS05395: succinate-semialdehyde dehdyrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

58% id,
91% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

38% id,
94% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

37% id,
96% cov

More...

HSERO_RS05645: succinate-semialdehyde dehdyrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

51% id,
92% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

37% id,
99% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

36% id,
98% cov

More...

HSERO_RS19755: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

44% id,
97% cov

AL1A1_HORSE / P15437: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Equus caballus

45% id,
95% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

45% id,
94% cov

More...

HSERO_RS04810: aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

41% id,
97% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

40% id,
95% cov

Q402C7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sphingomonas sp.

38% id,
97% cov

More...

HSERO_RS05710: aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

41% id,
95% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

39% id,
98% cov

ald / Q8NLZ0: acetaldehyde dehydrogenase (EC 1.2.1.3; EC 1.2.1.46) from Corynebacterium glutamicum

40% id,
94% cov

More...

HSERO_RS11260: aldehyde dehydrogenase
is similar to:
PaperBLAST

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

39% id,
95% cov

P30837: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

41% id,
92% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

39% id,
95% cov

More...

HSERO_RS23860: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

38% id,
97% cov

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

36% id,
98% cov

AL3H1_ARATH / Q70DU8: Aldehyde dehydrogenase family 3 member H1; AtALDH4; Ath-ALDH4; EC 1.2.1.3 from Arabidopsis thaliana
Q70DU8: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Arabidopsis thaliana

38% id,
94% cov

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HSERO_RS19695: aldehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

42% id,
87% cov

Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

37% id,
98% cov

Q8BH00: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

35% id,
98% cov

More...

HSERO_RS05765: salicylaldehyde dehydrogenase
is similar to:
PaperBLAST

ALDY_BACSU / P94358: Putative aldehyde dehydrogenase AldY; EC 1.2.1.3 from Bacillus subtilis

37% id,
98% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

36% id,
95% cov

AL1A1_BOVIN / P48644: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Bos taurus

36% id,
95% cov

More...

HSERO_RS22910: benzaldehyde dehydrogenase
is similar to:
PaperBLAST

ALDY_BACSU / P94358: Putative aldehyde dehydrogenase AldY; EC 1.2.1.3 from Bacillus subtilis

37% id,
99% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

34% id,
99% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

34% id,
98% cov

More...

HSERO_RS17620: aldehyde dehydrogenase
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

38% id,
96% cov

FUS7_GIBF5 / S0ENH1: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella fujikuroi

36% id,
98% cov

Q402C7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sphingomonas sp.

36% id,
95% cov

More...

HSERO_RS07235: aldehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

41% id,
89% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

38% id,
95% cov

AL1A7_RAT / P13601: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Rattus norvegicus

37% id,
95% cov

More...

HSERO_RS15395: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

33% id,
99% cov

AL1A7_RAT / P13601: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Rattus norvegicus

33% id,
99% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

34% id,
95% cov

More...

HSERO_RS24005: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

32% id,
99% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

34% id,
95% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

33% id,
96% cov

More...

HSERO_RS23245: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

33% id,
96% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

32% id,
96% cov

AL1A1_MACFA / Q8HYE4: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Macaca fascicularis

33% id,
94% cov

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HSERO_RS00905: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

AL1A1_BOVIN / P48644: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Bos taurus

33% id,
88% cov

AL1A1_SHEEP / P51977: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Ovis aries

33% id,
88% cov

FUS7_GIBF5 / S0ENH1: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella fujikuroi

30% id,
96% cov

More...

HSERO_RS02795: alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

30% id,
98% cov

HSERO_RS14040: alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

27% id,
92% cov

HSERO_RS20590: enoyl-CoA hydratase
is similar to:
PaperBLAST

AL9A1_ORYLA / Q19A30: 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; EC 1.2.1.47; EC 1.2.1.3 from Oryzias latipes

25% id,
93% cov

AL7A1_MOUSE / Q9DBF1: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Mus musculus
Q9DBF1: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Mus musculus

24% id,
86% cov

Q92UV7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sinorhizobium meliloti

25% id,
81% cov

More...

HSERO_RS17735: quinone oxidoreductase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

26% id,
70% cov

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

30% id,
24% cov

HSERO_RS00730: 4-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

30% id,
43% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

30% id,
43% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

26% id,
45% cov

HSERO_RS08800: NAD(P)H quinone oxidoreductase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

24% id,
51% cov

HSERO_RS02965: gamma-glutamyl phosphate reductase
is similar to:
PaperBLAST

CITD_MONPU / Q1ERI2: Aldehyde dehydrogenase mpl4; Citrinin synthesis protein mpl4; EC 1.2.1.3 from Monascus purpureus
CITD_MONRU / A0A162J448: Aldehyde dehydrogenase citD; Citrinin synthesis protein D; EC 1.2.1.3 from Monascus ruber

33% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1654099-1655793 (frame -2) on NC_014323
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus
Also see hits to annotated proteins above

39% id,
98% cov

Q9CZS1: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus
Also see hits to annotated proteins above

36% id,
97% cov

BALDH_ANTMA / C7A2A0: Benzaldehyde dehydrogenase, mitochondrial; 2-phenylacetaldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.28; EC 1.2.1.39; EC 1.2.1.3 from Antirrhinum majus
Also see hits to annotated proteins above

35% id,
97% cov

More...

5503885-5505549 (frame -2) on NC_014323
is similar to:
PaperBLAST

P47738: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus
Also see hits to annotated proteins above

33% id,
98% cov

ALDH2_HUMAN / P05091: Aldehyde dehydrogenase, mitochondrial; ALDH class 2; ALDH-E2; ALDHI; EC 1.2.1.3 from Homo sapiens
ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens
P05091: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens
Also see hits to annotated proteins above

32% id,
95% cov

Q9CZS1: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus
Also see hits to annotated proteins above

31% id,
97% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory