Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 23 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS01605: amino acid dehydrogenase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 29% id, 99% cov |
| HSERO_RS01275: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 25% id, 95% cov |
| HSERO_RS05695: D-amino acid oxidase is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 27% id, 70% cov |
| HSERO_RS05840: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 28% id, 63% cov |
| HSERO_RS05275: NADH-ubiquinone oxidoreductase subunit 6 is similar to: | PaperBLAST |
Q9RIA4: D-amino-acid oxidase (EC 1.4.3.3) from Mycobacterium leprae | 35% id, 38% cov |
| HSERO_RS08375: D-amino acid dehydrogenase small subunit is similar to: | PaperBLAST |
P80324: D-amino-acid oxidase (EC 1.4.3.3) from Rhodotorula toruloides | 26% id, 44% cov |
Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 39% id, 13% cov |
Q99042: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 39% id, 13% cov |
| HSERO_RS06790: 2-dehydropantoate 2-reductase is similar to: | PaperBLAST |
Q7X2D3: D-amino-acid oxidase (EC 1.4.3.3) from Glutamicibacter protophormiae | 38% id, 19% cov |
| HSERO_RS19590: dihydropyrimidine dehydrogenase subunit A is similar to: | PaperBLAST |
Q7X2D3: D-amino-acid oxidase (EC 1.4.3.3) from Glutamicibacter protophormiae | 59% id, 8% cov |
Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 50% id, 8% cov |
Q99042: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 50% id, 8% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory