Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 25 curated entries in PaperBLAST's database that match '1.4.4.2'.
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS07915: glycine cleavage system protein H is similar to: | PaperBLAST |
P23434: glycine cleavage system (subunit 3/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 39% id, 68% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1808135-1808536 (frame +2) on NC_014323 is similar to: | PaperBLAST |
P25855: glycine cleavage system (subunit 3/5) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Arabidopsis thaliana | 39% id, 73% cov |
Lawrence Berkeley National Laboratory