Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 7 curated entries in PaperBLAST's database that match '1.5.3.7'.
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS05840: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 35% id, 95% cov |
| HSERO_RS01275: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 29% id, 91% cov |
| HSERO_RS05650: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 29% id, 84% cov |
| HSERO_RS05695: D-amino acid oxidase is similar to: | PaperBLAST |
SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens | 34% id, 17% cov |
PIPOX / Q8N6Z6: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens | 33% id, 15% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory