Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 71 curated entries in PaperBLAST's database that match '2.1.2.1' as complete word(s).
These curated entries have 51 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS06140: serine hydroxymethyltransferase is similar to: | PaperBLAST |
B4ECY9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Burkholderia cenocepacia | 83% id, 100% cov |
A0A069BAT4: glycine hydroxymethyltransferase (EC 2.1.2.1) from Burkholderia pseudomallei | 83% id, 100% cov |
R9YJZ9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Shewanella algae | 65% id, 100% cov |
GLYA_SALTY / P0A2E1: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Salmonella typhimurium | 64% id, 100% cov |
A1SUU0: glycine hydroxymethyltransferase (EC 2.1.2.1) from Psychromonas ingrahamii | 63% id, 100% cov |
GLYA_STAAC / Q5HE87: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Staphylococcus aureus | 63% id, 99% cov |
GLYA_ECOLI / P0A825: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Escherichia coli | 62% id, 100% cov |
L7Y8B0: glycine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas plecoglossicida | 62% id, 100% cov |
PfGW456L13_2685: Glycine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens | 62% id, 100% cov |
glyA / P34895: serine hydroxymethyltransferase subunit (EC 2.1.2.1) from Hyphomicrobium methylovorum | 63% id, 96% cov |
GLYA_BACSU / P39148: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Bacillus subtilis | 61% id, 98% cov |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 63% id, 95% cov |
GLYA_THET8 / Q5SI56: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Thermus thermophilus | 60% id, 99% cov |
A8GTI9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Rickettsia rickettsii | 60% id, 99% cov |
GLYA2_BURP1 / Q3JGP5: Serine hydroxymethyltransferase 2; SHMT 2; Serine methylase 2; EC 2.1.2.1 from Burkholderia pseudomallei | 59% id, 98% cov |
glyA / P77962: glycine hydroxymethyltransferase (EC 2.1.2.1) from Synechocystis sp. | 59% id, 97% cov |
GLYA_METBF / Q46A52: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Methanosarcina barkeri | 56% id, 99% cov |
I7H6W6: glycine hydroxymethyltransferase (EC 2.1.2.1) from Aphanothece halophytica | 58% id, 96% cov |
Q5M0B4: glycine hydroxymethyltransferase (EC 2.1.2.1) from Streptococcus thermophilus | 56% id, 100% cov |
GLYA_CAMJE / P24531: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Campylobacter jejuni | 55% id, 99% cov |
GLYA2_MYCTU / P9WGI7: Serine hydroxymethyltransferase 2; SHM2; SHMT 2; Serine methylase 2; EC 2.1.2.1 from Mycobacterium tuberculosis | 54% id, 98% cov |
P56089: glycine hydroxymethyltransferase (EC 2.1.2.1) from Helicobacter pylori | 53% id, 98% cov |
U5TRK6: glycine hydroxymethyltransferase (EC 2.1.2.1) from Glutamicibacter nicotianae | 55% id, 95% cov |
GLYA1_MYCTU / P9WGI9: Serine hydroxymethyltransferase 1; SHM1; SHMT 1; Serine methylase 1; EC 2.1.2.1 from Mycobacterium tuberculosis | 53% id, 94% cov |
GLYC_BOMMO / Q2F5L3: Serine hydroxymethyltransferase; SHMT; Glycine hydroxymethyltransferase; Serine methylase; bmSHMT; EC 2.1.2.1 from Bombyx mori | 46% id, 91% cov |
GLYC_YEAST / P37291: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Saccharomyces cerevisiae | 44% id, 93% cov |
GLYC4_ARATH / O23254: Serine hydroxymethyltransferase 4; AtSHMT4; Glycine hydroxymethyltransferase 4; Serine methylase 4; EC 2.1.2.1 from Arabidopsis thaliana | 42% id, 96% cov |
F2QZA4: glycine hydroxymethyltransferase (EC 2.1.2.1) from Komagataella pastoris | 43% id, 92% cov |
Q7SXN1: glycine hydroxymethyltransferase (EC 2.1.2.1) from Danio rerio | 44% id, 90% cov |
GLYC_RABIT / P07511: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Oryctolagus cuniculus | 45% id, 89% cov |
Q86LS9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Leishmania donovani | 48% id, 83% cov |
GLYC_SHEEP / P35623: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Ovis aries | 44% id, 88% cov |
G7ILW0: glycine hydroxymethyltransferase (EC 2.1.2.1) from Medicago truncatula | 51% id, 77% cov |
GLYC_EREGS / Q75BQ6: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Eremothecium gossypii | 42% id, 92% cov |
GLYC_HUMAN / P34896: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Homo sapiens | 44% id, 88% cov |
GLYP3_ARATH / Q94JQ3: Serine hydroxymethyltransferase 3, chloroplastic; AtSHM3; AtSHMT3; Glycine hydroxymethyltransferase 3; Serine methylase 3; EC 2.1.2.1 from Arabidopsis thaliana | 50% id, 78% cov |
A5K8L9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Plasmodium vivax | 41% id, 94% cov |
GLYM_HUMAN / P34897: Serine hydroxymethyltransferase, mitochondrial; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Homo sapiens | 46% id, 84% cov |
GLYC_CANAL / O13426: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; SHMII; Serine methylase; EC 2.1.2.1 from Candida albicans | 43% id, 90% cov |
A9LDD9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Danio rerio | 45% id, 86% cov |
GLYM_MOUSE / Q9CZN7: Serine hydroxymethyltransferase, mitochondrial; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Mus musculus | 42% id, 90% cov |
GLYC_MOUSE / P50431: Serine hydroxymethyltransferase, cytosolic; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Mus musculus | 45% id, 84% cov |
GLYM_YEAST / P37292: Serine hydroxymethyltransferase, mitochondrial; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Saccharomyces cerevisiae | 43% id, 88% cov |
GLYM_SCHPO / Q10104: Serine hydroxymethyltransferase, mitochondrial; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Schizosaccharomyces pombe | 46% id, 83% cov |
SHMT / Q8W4V3: serine hydroxymethyltransferase (EC 2.1.2.1) from Chlamydomonas reinhardtii | 49% id, 78% cov |
GLYA_PLAF7 / Q8I566: Serine hydroxymethyltransferase; PfSHMTc; EC 2.1.2.1 from Plasmodium falciparum | 42% id, 89% cov |
GLYM1_ARATH / Q9SZJ5: Serine hydroxymethyltransferase 1, mitochondrial; AtSHMT1; Glycine hydroxymethyltransferase 1; Serine Transhydroxymethyltransferase; STM; Serine methylase 1; EC 2.1.2.1 from Arabidopsis thaliana | 45% id, 82% cov |
GLYM_EREGS / Q758F0: Serine hydroxymethyltransferase, mitochondrial; SHMT; Glycine hydroxymethyltransferase; Serine methylase; EC 2.1.2.1 from Eremothecium gossypii | 44% id, 82% cov |
GLYM2_ARATH / Q94C74: Serine hydroxymethyltransferase 2, mitochondrial; AtSHMT2; Glycine hydroxymethyltransferase 2; Serine methylase 2; EC 2.1.2.1 from Arabidopsis thaliana | 45% id, 78% cov |
Q58992: glycine hydroxymethyltransferase (EC 2.1.2.1) from Methanocaldococcus jannaschii | 38% id, 92% cov |
Q9UWT5: glycine hydroxymethyltransferase (EC 2.1.2.1) from Saccharolobus solfataricus | 31% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory