Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 35 curated entries in PaperBLAST's database that match '2.3.1.1' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS22795: N-acetyltransferase
is similar to:
PaperBLAST

MnaT / b1448: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli
mnaT / P76112: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli

63% id,
100% cov

HSERO_RS01730: N-acetylglutamate synthase
is similar to:
PaperBLAST

argJ: glutamate N-acetyltransferase/amino-acid acetyltransferase; EC 2.3.1.35 2.3.1.1 from Neisseria gonorrhoeae

55% id,
100% cov

ARGJ_THENN / Q9Z4S1: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Thermotoga neapolitana

39% id,
99% cov

ARGJ_GEOSE / Q07908: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Geobacillus stearothermophilus

40% id,
95% cov

More...

HSERO_RS17320: amino acid acetyltransferase
is similar to:
PaperBLAST

P22567: amino-acid N-acetyltransferase (EC 2.3.1.1) from Pseudomonas aeruginosa

51% id,
100% cov

ARGA_ECOLI / P0A6C5: Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS; EC 2.3.1.1 from Escherichia coli
ArgA / b2818: N-acetylglutamate synthase (EC 2.3.1.1) from Escherichia coli
argA / P0A6C5: N-acetylglutamate synthase (EC 2.3.1.1) from Escherichia coli

45% id,
100% cov

ARGA_MYCTU / O33289: Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS; EC 2.3.1.1 from Mycobacterium tuberculosis
O33289: amino-acid N-acetyltransferase (EC 2.3.1.1) from Mycobacterium tuberculosis

29% id,
67% cov

More...

HSERO_RS15640: phosphinothricin acetyltransferase
is similar to:
PaperBLAST

MnaT / b1448: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli
mnaT / P76112: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli

41% id,
95% cov

HSERO_RS07120: acetyltransferase
is similar to:
PaperBLAST

MnaT / b1448: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli
mnaT / P76112: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli

28% id,
77% cov

HSERO_RS21495: acetylglutamate kinase
is similar to:
PaperBLAST

Q87EL2: amino-acid N-acetyltransferase (EC 2.3.1.1) from Xylella fastidiosa

30% id,
63% cov

Q0ASS9: amino-acid N-acetyltransferase (EC 2.3.1.1); acetylglutamate kinase (EC 2.7.2.8) from Maricaulis maris

29% id,
60% cov

N515DRAFT_3768: N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) from Dyella japonica

29% id,
61% cov

HSERO_RS14630: histone acetyltransferase
is similar to:
PaperBLAST

DVU1587: N-acetylglutamate synthase (EC 2.3.1.1) from Desulfovibrio vulgaris

24% id,
74% cov

HSERO_RS05660: N-acetyltransferase GCN5
is similar to:
PaperBLAST

ARGA_MYCTU / O33289: Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS; EC 2.3.1.1 from Mycobacterium tuberculosis
O33289: amino-acid N-acetyltransferase (EC 2.3.1.1) from Mycobacterium tuberculosis

30% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory