Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 77 curated entries in PaperBLAST's database that match '2.3.1.31' as complete word(s).

These curated entries have 68 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS00455: homoserine O-acetyltransferase
is similar to:
PaperBLAST

METXA_SOLM1 / C4XNQ9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Solidesulfovibrio magneticus

48% id,
96% cov

metX / GB|CAA71733.1: homoserine O-acetyltransferase; EC 2.3.1.31 from Leptospira meyeri
metX / P94891: homoserine O-acetyltransferase (EC 2.3.1.31) from Leptospira meyeri
P94891: homoserine O-acetyltransferase (EC 2.3.1.31) from Leptospira meyeri

48% id,
95% cov

METXA_CAUVC / Q9AAS1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Caulobacter vibrioides

51% id,
89% cov

More...

HSERO_RS05350: hypothetical protein
is similar to:
PaperBLAST

METXA_TRIV2 / Q3M5Q6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Trichormus variabilis

30% id,
86% cov

METXA_PSYTT / K4ICC9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Psychroflexus torquis

26% id,
90% cov

METXA_HAEIN / P45131: Homoserine O-acetyltransferase; HAT; Homoserine O-trans-acetylase; Homoserine transacetylase; HTA; EC 2.3.1.31 from Haemophilus influenzae
P45131: homoserine O-acetyltransferase (EC 2.3.1.31) from Haemophilus influenzae

27% id,
81% cov

More...

HSERO_RS00460: methionine biosynthesis protein MetW
is similar to:
PaperBLAST

MTXAW_RHOBA / Q7UG04: Bifunctional methionine biosynthesis protein MetXA/MetW; EC 2.3.1.31 from Rhodopirellula baltica

36% id,
28% cov

HSERO_RS11315: histidine kinase
is similar to:
PaperBLAST

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum

31% id,
23% cov

HSERO_RS17945: hypothetical protein
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

48% id,
14% cov

HSERO_RS09565: membrane protein
is similar to:
PaperBLAST

METXA_METPE / B8GHE0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosphaerula palustris

40% id,
11% cov

METXA_METZD / F7XKY8: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosalsum zhilinae

31% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory