Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS01300: phosphate acetyltransferase is similar to:	PaperBLAST
CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima	41% id, 99% cov
EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli	27% id, 97% cov
pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens	24% id, 98% cov
PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum	25% id, 94% cov
pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum	26% id, 85% cov
B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis	23% id, 94% cov
PTAS_METTE / P38503: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Methanosarcina thermophila	25% id, 86% cov
EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica	30% id, 66% cov
Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi	26% id, 74% cov
O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus	24% id, 67% cov
PTA_SALTY / Q8ZND6: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.222; EC 2.3.1.8 from Salmonella typhimurium Q8ZND6: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica	27% id, 46% cov
C1DER7: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	26% id, 47% cov
PTA_ECOLI / P0A9M8: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Escherichia coli Pta / b2297: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli pta / P0A9M8: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli P0A9M8: phosphate acetyltransferase (EC 2.3.1.8) from Escherichia coli	26% id, 46% cov
C1DQG8: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	26% id, 44% cov
PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa	26% id, 43% cov
More...

HSERO_RS12030: phosphate acetyl/butaryl transferase is similar to:	PaperBLAST
CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima	41% id, 99% cov
Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi	27% id, 99% cov
PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum	26% id, 94% cov
PTAS_METTE / P38503: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Methanosarcina thermophila	24% id, 94% cov
O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus	22% id, 99% cov
pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens	26% id, 72% cov
pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum	28% id, 65% cov
B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis	27% id, 63% cov
pta / Q9F1X6: phosphotransacetylase (EC 2.3.1.8) from Fructilactobacillus sanfranciscensis	27% id, 60% cov
PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa	21% id, 52% cov
PTA_ECOLI / P0A9M8: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Escherichia coli Pta / b2297: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli pta / P0A9M8: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli P0A9M8: phosphate acetyltransferase (EC 2.3.1.8) from Escherichia coli	23% id, 48% cov
PTA_SALTY / Q8ZND6: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.222; EC 2.3.1.8 from Salmonella typhimurium Q8ZND6: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica	23% id, 48% cov
PAT2 / A8IZZ9: phosphate acetyltransferase (EC 2.3.1.8) from Chlamydomonas reinhardtii	28% id, 29% cov
C1DQG8: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	30% id, 27% cov
C1DER7: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	29% id, 27% cov
More...

HSERO_RS05745: NADP-dependent malic enzyme oxidoreductase is similar to:	PaperBLAST
EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica	33% id, 97% cov
EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli	33% id, 96% cov
pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum	29% id, 99% cov
PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum	29% id, 99% cov
pta / Q9F1X6: phosphotransacetylase (EC 2.3.1.8) from Fructilactobacillus sanfranciscensis	27% id, 95% cov
C1DER7: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	26% id, 51% cov
C1DQG8: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	27% id, 49% cov
PAT2 / A8IZZ9: phosphate acetyltransferase (EC 2.3.1.8) from Chlamydomonas reinhardtii	30% id, 42% cov
PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa	26% id, 46% cov
PTA_ECOLI / P0A9M8: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Escherichia coli Pta / b2297: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli pta / P0A9M8: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli P0A9M8: phosphate acetyltransferase (EC 2.3.1.8) from Escherichia coli	27% id, 45% cov
More...

HSERO_RS16825: NADP-dependent malic enzyme oxidoreductase is similar to:	PaperBLAST
PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum	33% id, 96% cov
pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum	32% id, 98% cov
B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis	32% id, 99% cov
EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica	31% id, 98% cov
O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus	30% id, 97% cov
pta / Q9F1X6: phosphotransacetylase (EC 2.3.1.8) from Fructilactobacillus sanfranciscensis	29% id, 99% cov
pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens	29% id, 97% cov
EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli	30% id, 94% cov
Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi	27% id, 98% cov
pta / P75359: phosphate acetyltransferase (EC 2.3.1.8) from Mycoplasma pneumoniae	27% id, 97% cov
CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima	25% id, 67% cov
C1DQG8: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	33% id, 45% cov
C1DER7: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii	29% id, 49% cov
PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa	30% id, 45% cov
PAT2 / A8IZZ9: phosphate acetyltransferase (EC 2.3.1.8) from Chlamydomonas reinhardtii	31% id, 44% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory