Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS14210: homocitrate synthase is similar to: | PaperBLAST |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii | 59% id, 95% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 51% id, 96% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 51% id, 92% cov |
HSERO_RS17185: 2-isopropylmalate synthase is similar to: | PaperBLAST |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 29% id, 90% cov |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 25% id, 94% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 29% id, 57% cov |
HSERO_RS04700: 2-isopropylmalate synthase is similar to: | PaperBLAST |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 26% id, 95% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 27% id, 87% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 25% id, 95% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory