Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 197 curated entries in PaperBLAST's database that match '2.4.2.1'.
These curated entries have 142 distinct sequences.
Running ublast with E ≤ 0.01
Found 15 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS20350: ATP phosphoribosyltransferase is similar to: | PaperBLAST |
HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae | 100% id, 100% cov |
BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans | 84% id, 93% cov |
Psest_3299: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas stutzeri | 59% id, 97% cov |
| HSERO_RS19445: anthranilate phosphoribosyltransferase is similar to: | PaperBLAST |
TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris | 69% id, 99% cov |
TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus | 44% id, 100% cov |
TRPD_MYCTU / P9WFX5: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Mycobacterium tuberculosis | 40% id, 94% cov |
| HSERO_RS16445: amidophosphoribosyltransferase is similar to: | PaperBLAST |
PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli | 58% id, 97% cov |
PUR1_YEAST / P04046: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; EC 2.4.2.14 from Saccharomyces cerevisiae | 49% id, 99% cov |
ade4 / RF|NP_594961.1: amidophosphoribosyltransferase Ade4; EC 2.4.2.14 from Schizosaccharomyces pombe | 50% id, 93% cov |
| HSERO_RS15065: laccase is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli | 56% id, 99% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 33% id, 92% cov |
PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic | 32% id, 90% cov |
| HSERO_RS23380: orotate phosphoribosyltransferase is similar to: | PaperBLAST |
PYRE_SALTY / P08870: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Salmonella typhimurium | 56% id, 98% cov |
PYRE_ECOLI / P0A7E3: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Escherichia coli | 56% id, 98% cov |
PYRE_YEAST / P13298: Orotate phosphoribosyltransferase 1; OPRT 1; OPRTase 1; EC 2.4.2.10 from Saccharomyces cerevisiae | 43% id, 97% cov |
| HSERO_RS11070: nicotinate-nucleotide pyrophosphorylase is similar to: | PaperBLAST |
NADC_SALTY / P30012: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Salmonella typhimurium | 51% id, 97% cov |
NADC_ECOLI / P30011: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Escherichia coli | 51% id, 91% cov |
NADC_MYCTU / P9WJJ7: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Mycobacterium tuberculosis | 42% id, 96% cov |
| HSERO_RS08805: triosephosphate isomerase is similar to: | PaperBLAST |
P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens | 40% id, 91% cov |
| HSERO_RS07175: hypothetical protein is similar to: | PaperBLAST |
PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2 from Escherichia coli | 33% id, 99% cov |
| HSERO_RS04285: glycosyl transferase is similar to: | PaperBLAST |
TRPD_SACS2 / P50384: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Saccharolobus solfataricus | 25% id, 70% cov |
BT0530: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Bacteroides thetaiotaomicron | 24% id, 59% cov |
CA265_RS05010: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Pedobacter sp. | 22% id, 53% cov |
| HSERO_RS19440: anthranilate synthase subunit II is similar to: | PaperBLAST |
TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli | 43% id, 35% cov |
TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium | 43% id, 35% cov |
| HSERO_RS21060: hypothetical protein is similar to: | PaperBLAST |
PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis | 23% id, 64% cov |
ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana | 23% id, 59% cov |
ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana | 25% id, 51% cov |
| HSERO_RS22125: glucosamine--fructose-6-phosphate aminotransferase is similar to: | PaperBLAST |
PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis | 28% id, 47% cov |
ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana | 30% id, 39% cov |
ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana | 30% id, 39% cov |
| HSERO_RS08995: hypothetical protein is similar to: | PaperBLAST |
ura5 / RF|NP_595495.1: orotate phosphoribosyltransferase Ura5; EC 2.4.2.10 from Schizosaccharomyces pombe | 32% id, 34% cov |
| HSERO_RS21005: asparagine synthase is similar to: | PaperBLAST |
ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana | 30% id, 31% cov |
PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis | 23% id, 39% cov |
ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana | 29% id, 28% cov |
| HSERO_RS21075: asparagine synthase is similar to: | PaperBLAST |
PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis | 27% id, 30% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 13 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1996476-1997291 (frame +3) on NC_014323 is similar to: | PaperBLAST |
P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens | 41% id, 95% cov |
| 4816793-4818721 (frame +2) on NC_014323 is similar to: | PaperBLAST |
ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana | 25% id, 52% cov |
Lawrence Berkeley National Laboratory