Curated BLAST for Genomes

 

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 39 curated entries in PaperBLAST's database that match '2.4.2.17' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS20350: ATP phosphoribosyltransferase
is similar to:
PaperBLAST

HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae

100% id,
100% cov

BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans

84% id,
93% cov

Psest_3299: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas stutzeri

59% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory