Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).
These curated entries have 22 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS07160: phospho-2-dehydro-3-deoxyheptonate aldolase is similar to: | PaperBLAST |
AroG / b0754: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli | 68% id, 99% cov |
Q9K169: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Neisseria meningitidis | 62% id, 97% cov |
2-dehydro-3-deoxyphosphoheptonate aldolase / b1704: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli | 55% id, 100% cov |
| HSERO_RS13915: 2-dehydro-3-deoxyphosphooctonate aldolase is similar to: | PaperBLAST |
Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix | 31% id, 85% cov |
Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima | 33% id, 72% cov |
P39912: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54); chorismate mutase (EC 5.4.99.5) from Bacillus subtilis | 28% id, 66% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory