Curated BLAST
Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS16670: acetylornithine aminotransferase is similar to: | PaperBLAST |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 41% id, 97% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 45% id, 89% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 45% id, 89% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 43% id, 91% cov |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 43% id, 88% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 39% id, 97% cov |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 40% id, 94% cov |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 38% id, 98% cov |
BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron | 33% id, 100% cov |
Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis | 33% id, 95% cov |
More... |
HSERO_RS05420: 4-aminobutyrate aminotransferase is similar to: | PaperBLAST |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 36% id, 93% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 37% id, 92% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 37% id, 92% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 36% id, 92% cov |
BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron | 34% id, 98% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 36% id, 91% cov |
Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis | 35% id, 94% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 35% id, 93% cov |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 35% id, 92% cov |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 35% id, 92% cov |
More... |
HSERO_RS17580: hypothetical protein is similar to: | PaperBLAST |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 34% id, 94% cov |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 33% id, 95% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 33% id, 94% cov |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 33% id, 92% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 32% id, 94% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 31% id, 93% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 31% id, 92% cov |
BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron | 29% id, 95% cov |
Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis | 30% id, 82% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 32% id, 54% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 38% id, 37% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 36% id, 37% cov |
More... |
HSERO_RS19685: 4-aminobutyrate aminotransferase is similar to: | PaperBLAST |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 31% id, 94% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 32% id, 90% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 32% id, 90% cov |
Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis | 31% id, 92% cov |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 31% id, 91% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 30% id, 93% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 32% id, 60% cov |
BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron | 37% id, 52% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 32% id, 60% cov |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 32% id, 54% cov |
More... |
HSERO_RS05635: hypothetical protein is similar to: | PaperBLAST |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 31% id, 94% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 31% id, 94% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 31% id, 94% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 31% id, 88% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 28% id, 88% cov |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 26% id, 95% cov |
BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron | 25% id, 97% cov |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 26% id, 87% cov |
Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis | 23% id, 95% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 29% id, 52% cov |
More... |
HSERO_RS23240: omega amino acid--pyruvate aminotransferase is similar to: | PaperBLAST |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 31% id, 95% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 29% id, 99% cov |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 31% id, 90% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 29% id, 95% cov |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 29% id, 94% cov |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 28% id, 96% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 32% id, 64% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 32% id, 64% cov |
BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron | 31% id, 30% cov |
More... |
HSERO_RS19190: glutamate-1-semialdehyde 2,1-aminomutase is similar to: | PaperBLAST |
ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa | 30% id, 92% cov |
ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli | 29% id, 87% cov |
A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli | 29% id, 87% cov |
PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae | 27% id, 92% cov |
ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium | 31% id, 79% cov |
HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens | 30% id, 79% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens | 26% id, 92% cov |
BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis | 30% id, 77% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory