Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 2 curated entries in PaperBLAST's database that match '2.7.1.13' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS07545: 2-dehydro-3-deoxygluconokinase is similar to: | PaperBLAST |
Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator | 56% id, 100% cov |
Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens | 53% id, 95% cov |
| HSERO_RS05105: ribokinase is similar to: | PaperBLAST |
Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens | 28% id, 88% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory