Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).
These curated entries have 24 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS11500: ribokinase is similar to: | PaperBLAST |
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae | 100% id, 100% cov |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 54% id, 97% cov |
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 52% id, 97% cov |
HSERO_RS05105: ribokinase is similar to: | PaperBLAST |
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila | 58% id, 100% cov |
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans | 60% id, 93% cov |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 41% id, 98% cov |
HSERO_RS08715: 2-dehydro-3-deoxygluconokinase is similar to: | PaperBLAST |
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila | 30% id, 93% cov |
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans | 30% id, 88% cov |
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus | 30% id, 87% cov |
HSERO_RS07545: 2-dehydro-3-deoxygluconokinase is similar to: | PaperBLAST |
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti | 27% id, 89% cov |
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila | 26% id, 82% cov |
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans | 27% id, 80% cov |
HSERO_RS18385: heptose 1-phosphate adenyltransferase is similar to: | PaperBLAST |
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli | 25% id, 97% cov |
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae | 24% id, 96% cov |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 23% id, 55% cov |
HSERO_RS02180: fructokinase is similar to: | PaperBLAST |
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae | 23% id, 99% cov |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 35% id, 27% cov |
P71913: ribokinase (EC 2.7.1.15) from Mycobacterium tuberculosis | 30% id, 31% cov |
HSERO_RS12125: 5-dehydro-2-deoxygluconokinase is similar to: | PaperBLAST |
B8CWQ8: ribokinase (EC 2.7.1.15) from Halothermothrix orenii | 27% id, 55% cov |
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 29% id, 43% cov |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 31% id, 39% cov |
HSERO_RS17335: ribose 5-phosphate isomerase is similar to: | PaperBLAST |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 34% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory