Curated BLAST
Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).
These curated entries have 24 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS17030: xylulokinase is similar to: | PaperBLAST |
SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti | 54% id, 99% cov |
Dshi_1997: Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae | 52% id, 99% cov |
BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis | 52% id, 99% cov |
XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli | 51% id, 99% cov |
PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens | 47% id, 99% cov |
C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis | 37% id, 98% cov |
Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima | 36% id, 99% cov |
Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 33% id, 99% cov |
mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 33% id, 97% cov |
AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 32% id, 99% cov |
XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis | 31% id, 99% cov |
Q8NU35: xylulokinase (EC 2.7.1.17) from Corynebacterium glutamicum | 32% id, 95% cov |
Echvi_1875: xylulokinase (EC 2.7.1.17) from Echinicola vietnamensis | 28% id, 96% cov |
BT0792: xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron | 27% id, 99% cov |
More... |
HSERO_RS02220: xylulokinase is similar to: | PaperBLAST |
BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis | 53% id, 100% cov |
XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli | 53% id, 100% cov |
Dshi_1997: Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae | 51% id, 100% cov |
PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens | 50% id, 99% cov |
SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti | 50% id, 98% cov |
C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis | 40% id, 96% cov |
Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima | 36% id, 98% cov |
XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis | 36% id, 95% cov |
Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 35% id, 98% cov |
mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 34% id, 98% cov |
AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 34% id, 98% cov |
Q8NU35: xylulokinase (EC 2.7.1.17) from Corynebacterium glutamicum | 33% id, 96% cov |
Echvi_1875: xylulokinase (EC 2.7.1.17) from Echinicola vietnamensis | 27% id, 98% cov |
BT0792: xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron | 27% id, 97% cov |
More... |
HSERO_RS05475: gluconokinase is similar to: | PaperBLAST |
C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis | 32% id, 98% cov |
Dshi_1997: Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae | 29% id, 100% cov |
XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis | 29% id, 96% cov |
SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti | 28% id, 99% cov |
BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis | 28% id, 99% cov |
mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 28% id, 98% cov |
Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima | 27% id, 99% cov |
XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli | 27% id, 99% cov |
AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 28% id, 90% cov |
PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens | 28% id, 91% cov |
Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens | 27% id, 90% cov |
BT0792: xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron | 27% id, 89% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory