Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 4 curated entries in PaperBLAST's database that match '2.7.1.229' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS11500: ribokinase is similar to: | PaperBLAST |
deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi | 41% id, 96% cov |
| HSERO_RS05105: ribokinase is similar to: | PaperBLAST |
deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi | 36% id, 96% cov |
| HSERO_RS08715: 2-dehydro-3-deoxygluconokinase is similar to: | PaperBLAST |
deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi | 25% id, 95% cov |
| HSERO_RS02180: fructokinase is similar to: | PaperBLAST |
deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi | 28% id, 43% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory