Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Herbaspirillum seropedicae SmR1 (HerbieS)

Found 36 curated entries in PaperBLAST's database that match '2.7.1.30'.

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS04875: glycerol kinase is similar to:	PaperBLAST
A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae	56% id, 98% cov
GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus	55% id, 99% cov
PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae	56% id, 96% cov
GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli	55% id, 98% cov
GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus	54% id, 99% cov
Dshi_3420: Glycerol kinase (EC 2.7.1.30) from Dinoroseobacter shibae	52% id, 95% cov
SM_b21009: Glycerol kinase (EC 2.7.1.30) from Sinorhizobium meliloti	50% id, 99% cov
D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.	49% id, 97% cov
GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis	49% id, 97% cov
GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii	49% id, 97% cov
GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus	49% id, 96% cov
GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis	49% id, 97% cov
P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis	49% id, 96% cov
P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.	48% id, 91% cov
GLPK_ARATH / Q9M8L4: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; Protein GLYCEROL INSENSITIVE 1; Protein NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1; EC 2.7.1.30 from Arabidopsis thaliana	44% id, 98% cov
GLPK_HUMAN / P32189: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Homo sapiens	48% id, 90% cov
GLPK_RAT / Q63060: Glycerol kinase; Glycerokinase; ATP-stimulated glucocorticoid-receptor translocation promoter; ASTP; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Rattus norvegicus	47% id, 90% cov
GLPK_MOUSE / Q64516: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Mus musculus	47% id, 90% cov
Q0IID9: glycerol kinase (EC 2.7.1.30) from Bos taurus	47% id, 90% cov
GLPK_TRYBB / Q9NJP9: Glycerol kinase, glycosomal; GK; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Trypanosoma brucei Q9NJP9: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM4: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM3: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei	43% id, 99% cov
GLPK2_HUMAN / Q14410: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Homo sapiens	47% id, 90% cov
B0M0V1: glycerol kinase (EC 2.7.1.30) from Bombyx mori	43% id, 96% cov
Q75T26: glycerol kinase (EC 2.7.1.30) from Trypanosoma congolense	42% id, 99% cov
B0I530: glycerol kinase (EC 2.7.1.30) from Trypanosoma vivax	42% id, 98% cov
GLPK2_MOUSE / Q9WU65: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Mus musculus Q9WU65: glycerol kinase (EC 2.7.1.30) from Mus musculus	45% id, 89% cov
B0Y6Y4: glycerol kinase (EC 2.7.1.30) from Aspergillus fumigatus	42% id, 89% cov
B0I1G6: glycerol kinase (EC 2.7.1.30) from Bombyx mori	39% id, 90% cov
Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens	30% id, 95% cov
Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens	34% id, 21% cov
More...

HSERO_RS05475: gluconokinase is similar to:	PaperBLAST
GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis	26% id, 98% cov
PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae	27% id, 94% cov
GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus	26% id, 91% cov
GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus	26% id, 94% cov
GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus	26% id, 91% cov
Q75T26: glycerol kinase (EC 2.7.1.30) from Trypanosoma congolense	25% id, 97% cov
A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae	26% id, 91% cov
Dshi_3420: Glycerol kinase (EC 2.7.1.30) from Dinoroseobacter shibae	26% id, 92% cov
SM_b21009: Glycerol kinase (EC 2.7.1.30) from Sinorhizobium meliloti	26% id, 92% cov
B0M0V1: glycerol kinase (EC 2.7.1.30) from Bombyx mori	25% id, 93% cov
B0I530: glycerol kinase (EC 2.7.1.30) from Trypanosoma vivax	25% id, 93% cov
GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli	25% id, 91% cov
P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis	26% id, 89% cov
GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii	25% id, 91% cov
GLPK_TRYBB / Q9NJP9: Glycerol kinase, glycosomal; GK; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Trypanosoma brucei Q9NJP9: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM4: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM3: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei	24% id, 93% cov
GLPK_ARATH / Q9M8L4: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; Protein GLYCEROL INSENSITIVE 1; Protein NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1; EC 2.7.1.30 from Arabidopsis thaliana	25% id, 89% cov
D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.	24% id, 90% cov
B0Y6Y4: glycerol kinase (EC 2.7.1.30) from Aspergillus fumigatus	26% id, 83% cov
B0I1G6: glycerol kinase (EC 2.7.1.30) from Bombyx mori	25% id, 85% cov
Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens	26% id, 59% cov
Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens	27% id, 20% cov
More...

HSERO_RS17030: xylulokinase is similar to:	PaperBLAST
GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis	26% id, 88% cov
GLPK2_MOUSE / Q9WU65: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Mus musculus Q9WU65: glycerol kinase (EC 2.7.1.30) from Mus musculus	22% id, 88% cov
GLPK_HUMAN / P32189: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Homo sapiens	22% id, 88% cov
GLPK_RAT / Q63060: Glycerol kinase; Glycerokinase; ATP-stimulated glucocorticoid-receptor translocation promoter; ASTP; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Rattus norvegicus	22% id, 88% cov
GLPK_MOUSE / Q64516: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Mus musculus	22% id, 88% cov
Q0IID9: glycerol kinase (EC 2.7.1.30) from Bos taurus	22% id, 88% cov
GLPK2_HUMAN / Q14410: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Homo sapiens	22% id, 87% cov
More...

HSERO_RS05335: ribulokinase is similar to:	PaperBLAST
GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus	27% id, 39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory