Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 11 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS07545: 2-dehydro-3-deoxygluconokinase is similar to: | PaperBLAST |
K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli | 28% id, 92% cov |
Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri | 38% id, 29% cov |
| HSERO_RS05105: ribokinase is similar to: | PaperBLAST |
K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii | 28% id, 86% cov |
K1PF_XANCP / P23354: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Xanthomonas campestris | 31% id, 79% cov |
K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli | 26% id, 86% cov |
| HSERO_RS11500: ribokinase is similar to: | PaperBLAST |
AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens | 26% id, 88% cov |
| HSERO_RS02180: fructokinase is similar to: | PaperBLAST |
K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli | 30% id, 41% cov |
K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae | 23% id, 45% cov |
K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii | 44% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1722377-1723834 (frame +2) on NC_014323 is similar to: | PaperBLAST |
K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli | 27% id, 96% cov |
Lawrence Berkeley National Laboratory