Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 9 curated entries in PaperBLAST's database that match '2.7.1.58' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS05160: 2-dehydro-3-deoxygalactonokinase is similar to: | PaperBLAST |
HSERO_RS05160: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Herbaspirillum seropedicae | 100% id, 100% cov |
BPHYT_RS16950: 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) from Burkholderia phytofirmans | 53% id, 92% cov |
N515DRAFT_1233: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Dyella japonica | 44% id, 97% cov |
| HSERO_RS07545: 2-dehydro-3-deoxygluconokinase is similar to: | PaperBLAST |
KDGK2_HALVD / D4GR05: 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxygalactonate kinase; KDGal kinase; KDGK-2; EC 2.7.1.58 from Haloferax volcanii | 28% id, 96% cov |
| HSERO_RS11500: ribokinase is similar to: | PaperBLAST |
KDGK2_HALVD / D4GR05: 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxygalactonate kinase; KDGal kinase; KDGK-2; EC 2.7.1.58 from Haloferax volcanii | 27% id, 91% cov |
| HSERO_RS02180: fructokinase is similar to: | PaperBLAST |
KDGK2_HALVD / D4GR05: 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxygalactonate kinase; KDGal kinase; KDGK-2; EC 2.7.1.58 from Haloferax volcanii | 24% id, 97% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory