Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 7 curated entries in PaperBLAST's database that match '3.1.1.57' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS22275: 2-pyrone-4,6-dicarboxylate hydrolase is similar to: | PaperBLAST |
proL / Q75T30: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Pseudomonas straminea | 37% id, 95% cov |
LIGI_COMTE / Q93PS7: 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Comamonas testosteroni | 37% id, 95% cov |
D1MW98: 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Comamonas sp. | 36% id, 95% cov |
| HSERO_RS22245: 2-pyrone-4,6-dicarboxylate hydrolase is similar to: | PaperBLAST |
D1MW98: 2-pyrone-4,6-dicarboxylate lactonase (EC 3.1.1.57) from Comamonas sp. | 36% id, 94% cov |
proL / Q75T30: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Pseudomonas straminea | 35% id, 94% cov |
LIGI_COMTE / Q93PS7: 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Comamonas testosteroni | 35% id, 94% cov |
| HSERO_RS22980: membrane protein is similar to: | PaperBLAST |
LIGI_SPHSK / O87170: 2-pyrone-4,6-dicarboxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Sphingobium sp. | 36% id, 84% cov |
proL / Q75T30: 2-pyrone-4,6-dicarboxylate hydrolase (EC 3.1.1.57) from Pseudomonas straminea | 38% id, 76% cov |
LIGI_COMTE / Q93PS7: 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC 3.1.1.57 from Comamonas testosteroni | 38% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory