Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 134 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).
These curated entries have 79 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS00970: glucoamylase is similar to: | PaperBLAST |
TREH_MYCTU / P71741: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis | 31% id, 98% cov |
TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum | 30% id, 98% cov |
TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis | 30% id, 97% cov |
| HSERO_RS11645: alpha-amylase is similar to: | PaperBLAST |
AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28) | 34% id, 63% cov |
Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae | 45% id, 39% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory