Curated BLAST
Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 17 curated entries in PaperBLAST's database that match '3.2.1.93' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS11645: alpha-amylase
is similar to: | PaperBLAST |
TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93)
treA / P39795: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis | 36% id,
58% cov |
AAU39732.1: trehalose-6-P hydrolase (TreA;BlTreA;BLi00797;BL03069) (EC 3.2.1.93)
Q65MI2: alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Bacillus licheniformis | 35% id,
58% cov |
TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli | 34% id,
59% cov |
BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93) | 34% id,
59% cov |
BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93) | 34% id,
58% cov |
AO353_15985: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens | 33% id,
57% cov |
AAG31032.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93) | 32% id,
57% cov |
PS417_23045: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae | 32% id,
57% cov |
AAN06917.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93) | 33% id,
56% cov |
ABF38825.1: MGAS10750_Spy1875 (DexS) (EC 3.2.1.93) | 31% id,
58% cov |
AAV42863.1: LBA1014 (TreC;La1014) (EC 3.2.1.93) | 28% id,
57% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory