Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 7 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS13940: acetylornithine deacetylase is similar to: | PaperBLAST |
ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli | 34% id, 89% cov |
argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris | 27% id, 97% cov |
Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana | 23% id, 79% cov |
| HSERO_RS16100: acetylornithine deacetylase is similar to: | PaperBLAST |
ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli | 32% id, 92% cov |
argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris | 28% id, 98% cov |
| HSERO_RS10790: succinyl-diaminopimelate desuccinylase is similar to: | PaperBLAST |
ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum | 25% id, 81% cov |
Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana | 23% id, 54% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory