Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 8 curated entries in PaperBLAST's database that match '3.5.1.30' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS13165: acylamide amidohydrolase is similar to: | PaperBLAST |
AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 28% id, 100% cov |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 30% id, 86% cov |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 28% id, 92% cov |
HSERO_RS22865: NH(3)-dependent NAD(+) synthetase is similar to: | PaperBLAST |
B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 30% id, 89% cov |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 30% id, 89% cov |
HSERO_RS09455: NAD synthetase is similar to: | PaperBLAST |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 26% id, 98% cov |
B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 26% id, 93% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory