Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 3 curated entries in PaperBLAST's database that match '3.5.1.47' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS15925: amidohydrolase is similar to: | PaperBLAST |
DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium | 35% id, 98% cov |
DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis | 35% id, 93% cov |
| HSERO_RS05715: amidohydrolase is similar to: | PaperBLAST |
DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis | 35% id, 97% cov |
DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium | 34% id, 96% cov |
| HSERO_RS04135: amidohydrolase is similar to: | PaperBLAST |
DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium | 35% id, 90% cov |
DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis | 33% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory