Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 37 curated entries in PaperBLAST's database that match '3.5.99.6'.
These curated entries have 30 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS22765: iron dicitrate transport regulator FecR is similar to: | PaperBLAST |
BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans | 60% id, 100% cov |
PfGW456L13_4831: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 60% id, 99% cov |
AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 60% id, 100% cov |
HSERO_RS22125: glucosamine--fructose-6-phosphate aminotransferase is similar to: | PaperBLAST |
SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis | 31% id, 98% cov |
Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp. | 31% id, 98% cov |
Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis | 30% id, 98% cov |
HSERO_RS08725: transcriptional regulator is similar to: | PaperBLAST |
BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans | 29% id, 48% cov |
HSERO_RS22080: phosphoheptose isomerase is similar to: | PaperBLAST |
CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus | 29% id, 36% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory