Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 56 curated entries in PaperBLAST's database that match '4.1.1.19'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS17280: lysine decarboxylase is similar to: | PaperBLAST |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 36% id, 99% cov |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 35% id, 100% cov |
Q5NT93: arginine decarboxylase (EC 4.1.1.19) from Selenomonas ruminantium | 23% id, 64% cov |
| HSERO_RS00950: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A076IP90: arginine decarboxylase (EC 4.1.1.19) from Phocaeicola dorei | 25% id, 58% cov |
ADC / P49726: arginine decarboxylase (EC 4.1.1.19) from Solanum lycopersicum | 23% id, 59% cov |
Psest_3366: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas stutzeri | 24% id, 49% cov |
| HSERO_RS15115: aminotransferase is similar to: | PaperBLAST |
Q5NT93: arginine decarboxylase (EC 4.1.1.19) from Selenomonas ruminantium | 24% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory