Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 6 curated entries in PaperBLAST's database that match '4.1.1.44' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS19935: hydrolase is similar to: | PaperBLAST |
Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi | 38% id, 98% cov |
Q6SJC5: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Roseovarius nubinhibens | 38% id, 90% cov |
Q9L5B1: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sagittula stellata | 34% id, 96% cov |
HSERO_RS06525: 3-oxoadipate enol-lactonase is similar to: | PaperBLAST |
Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii | 42% id, 61% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory