Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 3 curated entries in PaperBLAST's database that match '4.2.1.100' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS19405: enoyl-CoA hydratase is similar to: | PaperBLAST |
bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus | 33% id, 99% cov |
D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus | 33% id, 99% cov |
O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica | 30% id, 90% cov |
| HSERO_RS20665: 2,3-dehydroadipyl-CoA hydratase is similar to: | PaperBLAST |
D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus | 34% id, 96% cov |
bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus | 31% id, 96% cov |
O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica | 29% id, 95% cov |
| HSERO_RS12745: enoyl-CoA hydratase is similar to: | PaperBLAST |
D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus | 30% id, 99% cov |
| HSERO_RS18840: enoyl-CoA hydratase is similar to: | PaperBLAST |
bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus | 31% id, 96% cov |
O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica | 27% id, 95% cov |
D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus | 22% id, 97% cov |
| HSERO_RS20640: enoyl-CoA hydratase is similar to: | PaperBLAST |
O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica | 28% id, 98% cov |
| HSERO_RS20020: enoyl-CoA hydratase is similar to: | PaperBLAST |
O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica | 27% id, 98% cov |
| HSERO_RS15435: enoyl-CoA hydratase is similar to: | PaperBLAST |
bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus | 26% id, 94% cov |
| HSERO_RS01270: enoyl-CoA hydratase is similar to: | PaperBLAST |
O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica | 25% id, 97% cov |
| HSERO_RS01610: enoyl-CoA hydratase is similar to: | PaperBLAST |
bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus | 25% id, 86% cov |
D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus | 29% id, 50% cov |
| HSERO_RS04120: hypothetical protein is similar to: | PaperBLAST |
D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus | 33% id, 58% cov |
bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus | 25% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory