Curated BLAST
Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 19 curated entries in PaperBLAST's database that match '4.3.2.1' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS14685: argininosuccinate lyase
is similar to: | PaperBLAST |
ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme
Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp. | 49% id,
99% cov |
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans | 49% id,
100% cov |
ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli
argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli | 46% id,
99% cov |
Q9P870: argininosuccinate lyase (EC 4.3.2.1) from Agaricus bisporus | 45% id,
100% cov |
ARLY_COLLI / Q01592: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Columba livia | 44% id,
99% cov |
arg7 / RF|NP_595129.1: argininosuccinate lyase; EC 4.3.2.1 from Schizosaccharomyces pombe | 42% id,
100% cov |
ARLY2_ANAPL / P24058: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin II; Delta-2 crystallin; EC 4.3.2.1 from Anas platyrhynchos | 43% id,
97% cov |
ARLY_HUMAN / P04424: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Homo sapiens
ASL / P04424: argininosuccinate lyase (EC 4.3.2.1) from Homo sapiens | 42% id,
99% cov |
ARLY_YEAST / P04076: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Saccharomyces cerevisiae | 42% id,
99% cov |
ARLY_MOUSE / Q91YI0: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Mus musculus | 42% id,
99% cov |
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis | 41% id,
99% cov |
ARLY_ANSAN / P33110: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Anser anser | 42% id,
98% cov |
Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis | 38% id,
82% cov |
CA265_RS18485: arginosuccinate lyase (EC 4.3.2.1) from Pedobacter sp. | 34% id,
87% cov |
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica | 33% id,
88% cov |
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron | 32% id,
86% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory