Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 8 curated entries in PaperBLAST's database that match '5.1.1.5' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS10740: alanine racemase is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 27% id, 97% cov |
| HSERO_RS19760: alanine racemase is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 24% id, 90% cov |
alr / Q88GJ9: amino acid racemase (EC 5.1.1.10; EC 5.1.1.24; EC 5.1.1.18; EC 5.1.1.2; EC 5.1.1.9; EC 5.1.1.5; EC 5.1.1.1) from Pseudomonas putida | 26% id, 77% cov |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 25% id, 77% cov |
| HSERO_RS19210: N-acetyl-gamma-glutamyl-phosphate reductase is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 38% id, 52% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory