Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 11 curated entries in PaperBLAST's database that match '5.1.3.29' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS05110: RbsD or FucU transport protein is similar to: | PaperBLAST |
FUCM_HUMAN / A2VDF0: Fucose mutarotase; EC 5.1.3.29 from Homo sapiens | 46% id, 94% cov |
FUCM_MOUSE / Q8R2K1: Fucose mutarotase; EC 5.1.3.29 from Mus musculus | 41% id, 95% cov |
FUCM_ECOLI / P0AEN8: L-fucose mutarotase; D-ribose pyranase; Fucose 1-epimerase; Type-2 mutarotase; EC 5.1.3.29; EC 5.4.99.62 from Escherichia coli | 37% id, 100% cov |
HSERO_RS05245: hypothetical protein is similar to: | PaperBLAST |
FUCM_XANCP / Q8P3K1: L-fucose mutarotase; Fucose 1-epimerase; Type-2 mutarotase; EC 5.1.3.29 from Xanthomonas campestris | 46% id, 89% cov |
BT1276: L-fucose mutarotase FucU (EC 5.1.3.29) from Bacteroides thetaiotaomicron | 44% id, 84% cov |
HSERO_RS22205: L-rhamnose mutarotase is similar to: | PaperBLAST |
SM_b21108: L-fucose mutarotase (EC 5.1.3.29) from Sinorhizobium meliloti | 28% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory