Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 18 curated entries in PaperBLAST's database that match '5.3.1.24' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS16480: N-(5'-phosphoribosyl)anthranilate isomerase is similar to: | PaperBLAST |
trpF: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Burkholderia multivorans | 63% id, 91% cov |
trpF / GB|AAA21897.1: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Acinetobacter calcoaceticus | 48% id, 99% cov |
trpF / Q56320: phosphoribosylanthranilate isomerase subunit (EC 5.3.1.24) from Thermotoga maritima | 43% id, 99% cov |
| HSERO_RS20320: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 33% id, 97% cov |
| HSERO_RS20315: imidazole glycerol phosphate synthase is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 28% id, 96% cov |
| HSERO_RS19450: indole-3-glycerol-phosphate synthase is similar to: | PaperBLAST |
TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli | 41% id, 53% cov |
P24920: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Phytophthora parasitica | 34% id, 44% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory