Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 11 curated entries in PaperBLAST's database that match '5.3.1.30' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS12140: 5-deoxyglucuronate isomerase is similar to: | PaperBLAST |
BPHYT_RS13925: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Burkholderia phytofirmans | 64% id, 99% cov |
AO353_21345: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens | 59% id, 99% cov |
AO356_23170: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens | 58% id, 99% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory