Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 4 curated entries in PaperBLAST's database that match '5.3.3.7'.
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS11420: 3-methylitaconate isomerase is similar to: | PaperBLAST |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 78% id, 98% cov |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 32% id, 80% cov |
| HSERO_RS07335: molybdenum ABC transporter substrate-binding protein is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 56% id, 95% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory