Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 3 curated entries in PaperBLAST's database that match '5.4.1.4' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS22245: 2-pyrone-4,6-dicarboxylate hydrolase is similar to: | PaperBLAST |
GLI_AGRFC / A9CEQ7: D-galactarolactone isomerase; GLI; Galactaro delta-lactone isomerase; EC 5.4.1.4 from Agrobacterium fabrum | 31% id, 93% cov |
HSERO_RS22275: 2-pyrone-4,6-dicarboxylate hydrolase is similar to: | PaperBLAST |
GLI_AGRFC / A9CEQ7: D-galactarolactone isomerase; GLI; Galactaro delta-lactone isomerase; EC 5.4.1.4 from Agrobacterium fabrum | 28% id, 92% cov |
HSERO_RS05450: hypothetical protein is similar to: | PaperBLAST |
GLI_AGRFC / A9CEQ7: D-galactarolactone isomerase; GLI; Galactaro delta-lactone isomerase; EC 5.4.1.4 from Agrobacterium fabrum | 28% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory