Curated BLAST
Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 14 curated entries in PaperBLAST's database that match '6.3.1.11' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS15690: glutamine synthetase
is similar to: | PaperBLAST |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 27% id,
97% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 27% id,
97% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 27% id,
97% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 27% id,
95% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 27% id,
95% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 31% id,
74% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 27% id,
80% cov |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 33% id,
62% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 30% id,
62% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 29% id,
63% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli
YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli
puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 28% id,
44% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory