Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS07180: argininosuccinate synthase is similar to: | PaperBLAST |
ASSY_ECOLI / P0A6E4: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Escherichia coli | 79% id, 98% cov |
ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermotoga maritima | 33% id, 97% cov |
ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus | 31% id, 97% cov |
| HSERO_RS03470: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase is similar to: | PaperBLAST |
S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens | 28% id, 30% cov |
ASSY_MOUSE / P16460: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Mus musculus | 36% id, 20% cov |
ASSY_RAT / P09034: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Rattus norvegicus | 36% id, 20% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory